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Hendrix, S.V., Mreyoud, Y., McNehlan, M.E., Smirnov, A., Chavez, S.M., Hie, B., Chamberland, M.M., Bradstreet, T.R., Webber, A.M., Kreamalmeyer, D., Taneja, R., Bryson, B.D., Edelson, B.T., Stallings, C.L.. 2024. BHLHE40 regulates myeloid cell polarization through IL-10-dependent and independent mechanisms. Journal of ImmunologyIn Press

Naik, S.K.*, McNehlan, M. E., Mreyoud, Y., Kinsella, R.L., Smirnov, A., Sur Chowdhury, C., McKee, S.R., Dubey, N., Woodson, R., Kreamalmeyer, D., and Stallings, C.L.*. 2023. Type I IFN signaling is the absence of IRGM1 promotes M. tuberculosis replication in immune cells by suppressing T cell responses. bioRxiv. doi: 10.1101/2023.10.03.560720. (co-corresponding authors)

Sarkar, S., Mayer Bridwell, A.E., Good, J.A.D., Wang, E.R., McKee, S.R., Valenta, J., Harrison, G.A., Flentie, K.N., Henry, F.L., Wixe, T., Demire, P., Vagolu, S.K., Chatagnon, J., Machelart, A., Brodin, P., Tønjum, T., Stallings, C.L.*, Almqvist, F.*. 2023. Design, synthesis, and evaluation of novel ∆2-thiazolino 2-pyridone derivatives that potentiate isoniazid activity in an isoniazid-resistant Mycobacterium tuberculosis mutant. Journal of Medicinal Chemistry. 66(16):11056-11077. PMCID: PMC10461229. (*co-corresponding authors)

Kinsella, R.L., Sur Chowdhury, C., Smirnov, A., Mreyoud, Y., Kimmey, J.M., Esaulova, E., Kreamalmeyer, D., Artyomov, M., Stallings, C.L.. 2023. ATG5 suppresses type I IFN-dependent neutrophil swarming and NETosis. bioRxiv. doi: 10.1101/2023.03.18.533244. (*co-corresponding authors)

Dubey, N., Woodson, R., McKee, S.R., Rosen, A.L., Rivera-Espinal, N., Kreamalmeyer, D., Kau, A.L., Stallings, C.L.. 2023. Autophagy functions in lung macrophages and dendritic cells to suppress TH17 responses and neutrophil accumulation during allergic airway inflammation. bioRxiv. doi: 10.1101/2023.03.16.533006.

Zhu, D.X.Z., Stallings, C.L.. 2023. Transcription regulation by CarD in mycobacteria is guided by basal promoter kinetics. Journal of Biological Chemistry. Apr 17;104724. doi: 10.1016/j.jbc.2023.104724. PMID: 37075846.

Popli, P., Tang, S., Chadchan1, S.B., Rucker, E.B., Guan, X., Monsivais, D., Lydon, J.P., Stallings, C.L., Moley, K.H., and Kommagani, R.. 2023. Beclin-1-Dependent Autophagy but Not Apoptosis Is Critical for Stem Cell Mediated-Endometrial Programming and the Establishment of Pregnancy. Developmental Cell. Apr 4;S1534-5807(23)00109-0. doi: 10.1016/j.devcel.2023.03.013. PMID: 37040770.

Blaine, H.C., Simmons, L.A., Stallings, C.L.. 2023. Diverse mechanisms of helicase loading during DNA replication initiation in bacteria. Journal of Bacteriology. Mar 6;e0048722.

Harrison, G.A., Cho, K., Wang, E.R., Sarkar, S., Almqvist, F., Patti, G.J., Stallings, C.L.. 2024. Inducing vulnerability to InhA inhibition restores isoniazid susceptibility in drug resistant Mycobacterium tuberculosis. mBio. In Press. bioRxiv. doi:10.1101/2023.02.06.527416.

Li, Y., Majumdar, S., Treen, R., Sharma, M.R., Corro, J., Gamper, H.B., Manjari, S.R., Prusa, J., Banavali, N.K., Stallings, C.L., Hou, Y., Agrawal, R.K., Ojha, A.K.. 2023. Starvation sensing by mycobacterial RelA/SpoT homologue through constitutive surveillance of translation. PNAS. 120(22):e2302006120. PMCID: PMC10235957.

Berida, T., McKee, S.R., Chatterjee, S., Manning, D., Li, W., Pandey, P., Tripathi, S.K., Mreyoud, Y., Smirnov, A., Doerksen, R.J., Jackson, M., Ducho, C., Stallings, C.L.*, Roy, S.*. 2023. Discovery, Synthesis, and Optimization of 1,2,4-Triazolyl Pyridines Targeting Mycobacterium tuberculosisACS Infectious Diseases. 9(11):2282-2298. PMCID: PMC10807233. Previous bioRxiv doi: 10.1101/2022.11.14.516356. (*co-corresponding authors)

Sur Chowdhury, C., Kinsella, R.L., Nehls, E.M., Naik, S.K., Lane, D.S., Talukdar, P., Chavez, S.M., Smirnov, A., Beatty, W., Kreamalmeyer, D., Mattila, J.T., Stallings, C.L.. 2022. Type I IFN signaling mediates NET release to promote Mycobacterium tuberculosis replication and granuloma caseation. bioRxiv. doi: 10.1101/2022.11.29.518376.

Kinsella, R.L.*, Kimmey, J.M., Smirnov, A., Woodson, R., Gaggioli, M.R., Chavez, S.M., Kreamalmeyer, D., Stallings, C.L.*. 2022. Autophagy prevents early proinflammatory responses and neutrophil recruitment during Mycobacterium tuberculosis infection without affecting pathogen burden in macrophages. PLOS Biology. 21(6):e3002159. PMID: 37319285. (*co-corresponding authors)

Feng, S., Nehls, E.M., Kinsella, R.L., Chavez, S.M., Naik, S.K., McKee, S.R., Dubey, N., Samuels, A., Swain, A., Cui, X., Hendrix, S.V., Woodson, R., Kreamalmeyer, D., Smirnov, A. Artyomov, M.N., Virgin, H.W., Wang, Y.*, Stallings, C.L.*. 2022. Autophagy protects against high-dose Mycobacterium tuberculosis infection. Nature Microbiology. In Press. bioRxiv. doi: 10.1101/2022.11.04.515158. (*co-corresponding authors)

Chadchan, S.B., Naik, S.K., Popli, P., Talwar, C., Putluri, S., Ambati, C.R., Lint, M.A., Kau, A.L., Stallings, C.L., Kommagani, R.. 2023. Gut microbiota and microbiota-derived metabolites promotes endometriosis. Cell Death Discovery. 9(1):28. PMCID: PMC9873805.

Samuels, A.N., Wang, E.R, Harrison, G.A., Valenta, J.C., Stallings, C.L., 2022. Understanding the contribution of metabolism to Mycobacterium tuberculosis drug tolerance. Frontiers Cellular and Infection Microbiology. Aug 22;12:958555. PMCID: PMC9441742.

Wang, Y., Sansone, A., Smirnov, A., Stallings, C.L., Orvedahl, A.. 2022. Myeloid autophagy genes protect mice against fatal TNF- and LPS-induced cytokine storm syndromes. Autophagy. Sep 2:1-14. PMID: 36056542.

Blaine, H.C., Burke, J.T., Ravi, J., Stallings, C.L.. 2022. DciA helicase operators exhibit diversity across bacterial phyla. Journal of Bacteriology. 204(8):e0016322. PMID: 35880876.

Rankin, A.N., Hendrix, S.V., Naik, S.K., Stallings, C.L.. 2022. Exploring the role of low-density neutrophils during Mycobacterium tuberculosis infection. Frontiers Cellular and Infection Microbiology. 12:901590. PMID: 35800386.

Prusa, J., Zhu, D.X., Flynn, A.J., Jensen, D., Ruiz Manzano, A., Galburt, E.A., Stallings, C.L.. 2022. Molecular dissection of RbpA-mediated regulation of fidaxomicin sensitivity in mycobacteria. Journal of Biological Chemistry. Journal of Biological Chemistry. 298(4):101752. PMCID: PMC8956947.

Mahoney, M., Damalanka, V.C., Tartell, M.A., Chung, D., Lourenço, A.L., Pwee, D., Mayer Bridwell, A.E., Hoffmann, M., Voss, J., Karmakar, P., Azouz, N.P., Klingler, A.M., Rothlauf, P.W., Thompson, C.E., Lee, M., Klampfer, L., Stallings, C.L., Rothenberg, M.E., Pöhlmann, S., Whelan, S.P., O’Donoghue, A.J., Craik, C.S., Janetka, J.W.. 2021. A novel class of TMPRSS2 inhibitors potently block SARS-CoV-2 and MERS-CoV viral entry and protect human epithelial lung cells. PNAS. 118(43):e2108728118. PMCID: PMC8694051.

Tukenmez, H., Sarkar, S., Anoosheh, S., Kruchanova, A., Edstrom, I., Harrison, G.A., Stallings, C.L., Almqvist, F., Larsson, C.. 2021. Mycobacterium tuberculosis Rv3160c is a TetR-like transcriptional repressor that regulates expression of the putative dioxygenase Rv3161c. Scientific Reports. 11(1):1523. PMCID: PMC7810876.

Klionsky, D.J., et al., 2021. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. 17(1):1-382. PMCID: PMC7996087.

Kinsella, R.L., Zhu, D.X., Harrison, G.A., Mayer Bridwell, A.E., Prusa, J., Chavez, S.M., and Stallings, C.L.. 2021. Perspectives and advances in the understanding of tuberculosis. Annual Review of Pathology. 16:377-408. PMID: 33497258.  

Balce, D.R., Wang, Y., McAllaster, M.R., Dunlap, B.F., Orvedahl, A., Hikes Jr, B.L., Droit, L., Handley, S.A., Wilen, C.B., Doench, J.G., Orchard, R.C., Stallings, C.L., Virgin, H.W.. 2021. UFMylation inhibits the pro-inflammatory capacity of interferon-γ-activated macrophages. PNAS. 118(1):e2011763118. PMCID: PMC7817147.

Kinsella, R.L. and Stallings, C.L.. 2020. A flexible and deadly way to control Salmonella infection. Immunity. 53(3):471-473. PMID: 32937145.

Wang, Y.*, Zaitsev, K., Lu, Q., Li, S., Schaiff, T., Kim, K., Droit, L., Wilen, C.B., Desai, C., Balce, D.R., Orchard, R.C., Orvedahl, A., Park, S., Kreamalmeyer, D., Handley, S.A., Pfeifer, J.D., Baldridge, M.T., Artyomov, M.N., Stallings, C.L.*, Virgin, H.W.*. 2019. Select autophagy genes maintain quiescence of tissue-resident macrophages and increase susceptibility to Listeria monocytogenes. Nature Microbiology. 5(2):272-281. PMID: 31959973. (*co-corresponding authors)

Harrison, G.A., Mayer Bridwell, A.E., Singh, M., Jayaraman, K., Weiss, L.A., Kinsella, R.L., Aneke, J., Flentie, K., Schene, M.E., Gaggioli, M., Solomon, S.D., Wildman, S.A., Meyers, M.J., Stallings, C.L.. 2019. Identification of 4-amino-thieno[2,3-d]pyrimidines as QcrB inhibitors in Mycobacterium tuberculosis. mSphere. 4(5):e00606-19. PMID: 31511370.

Feldman, M.F., Mayer, A.E., Scott, N.E., Vinogradov, E., McKee, S.R., Chavez, S.M., Twentyman, J., Stallings, C.L., Rosen, D.A., Harding, C.M.. 2019. An efficacious bioconjugate vaccine against hypervirulent Klebsiella pneumoniae. PNAS. 116(37):18655-18663. PMID: 31455739.

Zhu, D.X., Garner, A.L., Galburt, E.A., and Stallings, C.L.. 2019. CarD contributes to diverse gene expression outcomes throughout the genome of Mycobacterium tuberculosis. PNAS. 116(27):13573-13581. PMCID:PMC6613185.

Jensen, D., Ruiz Manzano, A., Rammohan, J., Stallings, C.L., Galburt, E.A.. 2019. CarD and RbpA modify the kinetics of initial transcription and slow promoter escape of the Mycobacterium tuberculosis RNA polymerase. Nucleic Acids Research. 47(13):6685-6698. PMCID:PMC6648326.

Flentie, K., Harrison, G.A., Tükenmez, H., Livny, J., Good, J.A.D., Sarkar, S., Zhu, D.X., Kinsella, R.L., Weiss, L.A., Solomon, S.D., Schene, M.E., Hansen, M.R., Cairns, A.G., Kulén, M., Wixe, T., Lindgren, A.E.G., Chorell, E. Bengtsson, C., Krishnan, K.S., Hultgren, S.J., Larsson, C., Almqvist, F., and Stallings, C.L.. 2019. Chemical disarming of isoniazid resistance in Mycobacterium tuberculosis. PNAS. 116(21):10510-10517. PMCID:PMC6535022.

Harding, C.M., Nasr, M.A., Scott, N.E., Goyette-Desjardins, G., Nothaft, H., Mayer, A.E., Chavez, S., Huynh, J.P., Kinsella, R.L., Szymanski, C.M., Stallings, C.L., Segura, M., and Feldman, M.F.. 2019. A platform for glycoengineering a polyvalent pneumococcal bioconjugate vaccine using E. coli as a host. Nature Communications. 10(1):891. PMCID: PMC6385209.

Prusa, J., Zhu, D.X., and Stallings, C.L.. 2018. The stringent response and Mycobacterium tuberculosis pathogenesis. Pathogens and Disease. 76(5):fty054. PMID: 29947752.

Huynh, J.P., Lin, C., Kimmey, J.M., Jarjour, N.N., Schwarzkopf, E.A., Bradstreet, T.R., Shchukina, I., Shpynov, O., Weaver, C.T., Taneja, R., Artyomov, M.N., Edelson, B.T.*, and Stallings, C.L.*. 2018. Bhlhe40 is an essential repressor of IL-10 during Mycobacterium tuberculosis infection. The Journal of Experimental Medicine. 215(7):1823-1838. PMCID: PMC6028511. (*Co-corresponding authors) Highlighted in a JEM Insight article

Prusa, J., Jensen, D., Santiago-Collazo, G., Pope, S.S., Garner, A.L., Miller, J.J., Ruiz Manzano, A., Galburt, E.A., and Stallings, C.L.. 2018. Domains within RbpA serve specific functional roles that regulate distinct mycobacterial gene subsets. Journal of Bacteriology. 200(13):e00690-17. PMCID: PMC5996690.

Yokoyama, C., Baldridge, M., Leung, D., Zhao, G., Desai, C., Liu, T., Diaz-Ochoa, V., Huynh, J., Kimmey, J., Sennott, E., Hole, C., Idol, R., Park, S., Storek, K., Wang, C., Hwang, S., Milam, A., Chen, E., Kerrinnes, T., Starnbach, M., Handley, S., Mysorekar, I., Allen, P., Monack, D., Dinauer, M., Doering, T., Tsolis, R., Dworkin, J., Stallings, C.L., Amarasinghe, G., Micchelli, C., and Virgin, H.. 2018. LysMD3 is a type II membrane protein without an in vivo role in the response to a range of pathogens. Journal of Biological Chemistry. 293(16):6022-6038. PMCID: PMC5912457.

Nair, S., Huynh, J.P., Lampropoulou, V., Loginicheva, E., Esaulova, E., Gounder, A.P., Boon, A.C.M., Schwarzkopf, E.A., Bradstreet, T.R,. Edelson, B.T., Artyomov, M.N., Stallings, C.L.*, and Diamond, M.S.*. 2018. Irg1 expression in myeloid cells prevents immunopathology during Mycobacterium tuberculosis infection. The Journal of Experimental Medicine. 215(4):1035-1045. PMCID: PMC5881474. (*Co-corresponding authors)

Potter, R., Wallace, M., McMullen, A., Prusa, J., Stallings, C.L., Burnham, C., Dantas, G.. 2018. blaIMP-27 on transferable plasmids in Proteus mirabilis and Providencia rettgeri. Clinical Microbiology and Infection. 24(9): 1019.e5-1019.e8. PMCID: PMC6105362.

Kinsella, R.L., Nehls, E.M., and Stallings, C.L.. 2018. Roles for autophagy proteins in immunity and host defense. Veterinary Pathology, 55(3):366-373. PMID: 29433400.

Mann, K.M., Huang, D.L., Hooppaw A.J., Logsdon, M.M., Richardson, K., Lee, H.J., Kimmey, J.M., Aldridge, B.B., and Stallings, C.L.. 2017. Rv0004 is a new essential member of the mycobacterial DNA replication machinery. PLOS Genetics. 13(11):e1007115. PMID: 29176877.

C.L. Stallings. 2017. Host response: Inflammation promotes TB growth. Nature Microbiology. 27(2):17102.PMID: 28653684.

Syal, K., Flentie, K., Bhardwaj, N., Maiti, K., Jayaraman, N., Stallings, C.L., and Chatterji, D.. 2017. Synthetic (p)ppGpp analogue: Potential inhibitor of stringent response in mycobacteria. Journal of Antimicrobial Agents and Chemotherapy. In Press. PMID: 28396544.

Kimmey, J.M., Campbell, J.A., Weiss, L.A., Monte, K.J., Lenschow, D.J., and Stallings, C.L.. 2017. The impact of ISGylation during Mycobacterium tuberculosis infection in mice. Microbes and Infection. 19(4-5):249-258. PMCID: PMC5403610.
      Selected as a highlighted open access article.

Garner, A.L., Rammohan, J., Huynh, J.P., Onder, L.M., Chen, J., Bae, B., Jensen, D., Weiss,L.A., Ruiz Manzano, A., Darst, S.A., Campbell, E.A., Nickels, B.E., Galburt, E.A., and Stallings, C.L.. 2017. Effects of Increasing the Affinity of CarD for RNA Polymerase on Mycobacterium tuberculosis Growth, rRNA Transcription, and Virulence. JBac. 199(4). pii: e00698-16. PMCID: PMC5287406.
      Selected as for a Journal of Bacteriology Spotlight, a distinction given to the best articles in each issue.

Kimmey, J.M. and Stallings, C.L.. 2016. Bacterial pathogens versus autophagy: Implications for therapeutic intervention. Trends in Molecular Medicine. 22(12):1160-1076. PMID: 27866924.

Mann, K.M., Pride, A., Flentie, K., Kimmey, J.M., Weiss, L.A., Stallings, C.L.. 2016. Analysis of the contribution of MTP and the predicted Flp pilus genes to Mycobacterium tuberculosis pathogenesis. Microbiology. 162(10):1784-1796. PMID: 27586540.

Rammohan, J., Ruiz-Manzano, A., Prusa, J., Garner, A.L., Stallings, C.L., and Galburt, E.A.. 2016. Cooperative stabilization of Mycobacterium tuberculosis rrnAP3 promoter open complexes by RbpA and CarD. Nucleic Acids Res. 44(15):7304-13. PMCID: PMC5009747.

Flentie, K., Garner, A.G., and Stallings, C.L.. 2016. The Mycobacterium tuberculosis transcription machinery: ready to respond to host attacks. JBac.198(9):1360-73. PMCID: PMC4836228.

Kimmey, J.M., Huynh, J.P., Weiss, L.A., Park, S., Kambal, A., Debnath, J., Virgin, H.W., and Stallings, C.L.. 2015. Unique role for ATG5 in neutrophil-mediated immunopathology during M. tuberculosis infection. Nature. 528(7583):565-9. PMID: 26649827.

Flentie, K.N., Stallings, C.L., Turk, J., Minnaard, A.J., Hsu, F.F.. 2016. Characterization of phthiocerol and phthiodiolone dimycocerosate esters of M. tuberculosis by multiple-stage linear ion-trap MS. J Lipid Res. 57(1):142-55. PMID: 26574042.

Watson, R.O., Bell, S.L., MacDuff, D.A., Kimmey, J.M., Diner, E.J., Olivas, J., Vance, R.E., Stallings, C.L., Virgin, H.W., and Cox, J.S.. 2015. cGAS detects Mycobacterium tuberculosis DNA to activate both type I interferon and autophagy. Cell Host & Microbe. 17(6):811-9. PMCID: PMC4466081.

Rammohan, J., Ruiz-Manzano, A., Garner, A.L., Stallings, C.L., and Galburt, E.A.. 2015. CarD stabilizes mycobacterial open complexes via a two-tiered kinetic mechanism. Nucleic Acids Res. In Press. PMID: 25697505.
     Selected as a Breakthrough Article, a designation given to the best papers published in Nucleic Acids Research each year

MacDuff, D.A., Reese, T.A., Kimmey, J.M., Weiss, L.A., Song, C., Zhang, X., Kambal, A., Duan, E., Carrero, J.A., Boisson, B., Laplantine, E., Israel, A., Picard, C., Colonna, M., Edelson, B.T., Sibley, L.D., Stallings, C.L., Casanova, J.L., Iwai, K., and Virgin, H.W.. 2015. Phenotypic complementation of genetic immunodeficiency by chronic herpesvirus infection. Elife. In Press. PMCID: PMC4298697.

Imlay, L.S., Armstrong, C.M., Masters, M.C., Lic, T., Price, K.E., Edwards, R.L., Mann, K.M., Li, L.X., Stallings, C.L., Berry, N.G., O’Neill, P.M., and Odom, A.R.. 2015. Plasmodium IspD (2-C-methyl-D-erythritol 4-phosphate cytidyltransferase), an essential and druggable antimalarial target. ACS Infectious Diseases. In Press.

Robert Landick, Azra Krek, Michael S. Glickman, Nicholas D. Socci, and Christina L. Stallings. 2014. Genome-Wide Mapping of the Distribution of CarD, RNAP σA, and RNAP β on the Mycobacterium smegmatis Chromosome using Chromatin Immunoprecipitation Sequencing. Genomics Data. 2:110-113. PMCID: PMC4115788

Ashley L. Garner, Leslie A. Weiss, Ana Ruiz Manzano, Eric A. Galburt, and Christina L. Stallings. 2014. CarD integrates three functional modules to promote efficient transcription, antibiotic tolerance, and pathogenesis in mycobacteria. Molecular Microbiology. 93(4):682-97. PMCID: PMC4127138

Radha Gopal, Leticia Monin, Samantha Slight, Uzodinma Uche, Emmeline Blanchard, Beth A. Fallert Junecko, Christina L. Stallings, Todd A. Reinhart, Jay Kolls, Uma Nagarajan, Javier Rangel-Moreno and Shabaana A. Khader. 2014. IL-17 is required for protection against Mycobacterium tuberculosis “hypervirulent” HN878 infection. PLOS Pathogens.10(5):e1004099. PMCID: PMC4022785

Leslie A. Weiss and Christina L. Stallings. 2013. Essential Roles for Mycobacterium tuberculosis RelMtb beyond the production of (p)ppGpp. JBac. 195(24):5629-5638. PMCID: PMC3889611.

Srivastava, D. B., Leon, K, Osmundson, J, Garner, A., Weiss, L. A., Westblade, L., Glickman, M. S., Landick, R., Darst, S. A., and *Stallings, C. L., and *Campbell, E.A.. 2013. Structure and function of CarD, an essential Mycobacterial transcription factor. PNAS. 110(31):12619-24. PMCID: PMC3732983. (*Co-corresponding authors).

Roxane Tussiwand, Wan-Ling Lee, Theresa L. Murphy, Mona Mashayekhi, Jörn C. Albring, Ansuman T. Satpathy, Wumesh KC, Jeffrey A. Rotondo, Brian T. Edelson, Nicole M. Kretzer, Xiaodi Wu, Michael Behnke, Leslie A. Weiss, Samuel S.K. Lam, Cora T. Aurthur, Christina L. Stallings, L. David Sibley, Robert D. Schreiber, and Kenneth M. Murphy. 2012. BATF leucine zipper-dependent interactions with IRF factors mediate class switch recombination, TH17 development and a novel Batf3-independent pathway of CD8a+ cDC development. Nature. 490(7421):502-7.

Weiss, L. A., Harrison, P. G., Nickels, B. E., Glickman, M. S., Campbell, E. A., Darst, S. A., and Stallings, C. L. 2012. The interaction of CarD with RNAP mediates Mycobacterium tuberculosis viability, rifampicin resistance, and persistence. JBac. 194(20):5621-31. Selected for the Journal Highlights Section of Microbe

Stallings, C. L., L. Chu, L. X. Li, and M. S. Glickman. 2011. Catalytic and non-catalytic roles for the mono-ADP-ribosyltransferase Arr in the mycobacterial DNA damage response. PLoS One. 6(7):e21807.

Barkan, D., Stallings, C. L., and Glickman, M. S. 2011. An improved counterselectable marker system for mycobacterial recombination using galK and 2-Deoxy-Galactose. Gene. 470(1-2):31-6.

*Stallings, C. L. and Glickman, M. S. 2011. CarD: A new RNA polymerase modulator in mycobacteria. Transcription. 2(1):15-18. (*Corresponding Author)

Stallings, C. L. and M. S. Glickman. 2010. Is Mycobacterium tuberculosis stressed out? A critical assessment of the genetic evidence. Microbes and Infection. 12(14-15):1091-101.

Stallings, C. L., N. C. Stephanou, L. Chu, A. Hochschild, B. E. Nickels, and M. S. Glickman. 2009. CarD is an essential regulator of rRNA transcription required for Mycobacterium tuberculosis persistence. Cell. 138(1):146-59. Comments in:
L.E. Connolly and J.S. Cox. 2009. Cell Host Microbe. 6(1):1-2.
S. Molloy. 2009. Nature Reviews Microbiology. 7:618.

Stallings, C. L. and Silverstein, S. J. 2006. Posttranslational modification and cell-type specific degradation of varicella-zoster virus ORF29p. J Virol. 80:10836-46.

Stallings, C. L., G. J. Duigou, A. A. Gershon, M. D. Gershon, and S. J. Silverstein. 2006. The cellular localization pattern of varicella-zoster virus ORF29p is influenced by proteasome- mediated degradation. J Virol. 80:1497-1512.

Stallings, C. L. and Silverstein, S. J. 2005. Dissection of a novel nuclear localization signal in open reading frame 29 of varicella-zoster virus. J Virol. 79:13070-81.

Book Chapters

Aldrich, C.C., Wallis, R.S., Remmel, R.P., Hegde, P.,and Stallings, C.L.. 2021. Antitubercular Agents. In Burgers Medicinal Chemistry, Drug Discovery and Development, Eighth Edition. Edited by Donald J. Abraham and Michael Myers. John Wiley & Sons, Inc. DOI: 10.1002/0471266949.bmc298

Walters, M.S., Kyratsous, C.A., Stallings, C.L., Lungu, O. and Silverstein, S.J.. 2010. “What Doesn’t Belong and Why; a Saga of Latency Associated Proteins Elaborated by Varicella Zoster Virus” In: From the Hallowed Halls of Herpesvirology: Review Series Commemorating the 80th Birthday of Bernard Roizman, Sc.D., J.A. Blaho and J.D. Baines editors, World Scientific Publishing company, Hackensack, NJ, USA. DOI: 10.1142/9789814338998_0002